Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006615.1 Corchorus olitorius cultivar O-4 contig06640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1002

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
121--172
6
9.2
6
84
16
67
15
15
0
69
1.20
115--172
21
2.9
21
72
27
63
15
15
0
68
1.20
115--168
27
2.1
26
93
6
92
14
14
0
70
1.17
121--178
27
2.1
27
87
6
82
15
15
0
68
1.20
531--569
10
3.6
10
81
18
51
0
0
12
87
0.55
537--568
13
2.6
12
90
9
55
0
0
9
90
0.45

Tables:   1

The End!