Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006813.1 Corchorus olitorius cultivar O-4 contig06838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1293

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96--183
21
4.4
21
72
18
89
26
10
0
63
1.26
144--203
19
3.2
18
70
21
52
21
11
1
65
1.34
71--242
81
2.1
83
87
7
244
23
10
0
65
1.28
142--274
44
3.0
45
84
6
155
24
9
1
64
1.31
117--285
37
4.5
36
72
19
123
25
8
1
65
1.28
219--276
27
2.1
27
84
6
73
25
5
1
67
1.21
241--283
19
2.3
19
83
0
59
27
2
2
67
1.15
84--280
4
50.0
4
65
18
67
25
8
1
64
1.28
350--384
14
2.5
14
86
13
54
25
5
0
68
1.11

Tables:   1

The End!