Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006896.1 Corchorus olitorius cultivar O-4 contig06921, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1256

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
137--537
22
18.6
22
70
10
123
37
16
9
35
1.82
181--240
21
2.8
20
85
7
66
40
15
13
31
1.85
359--420
23
2.7
23
95
2
108
38
19
4
37
1.73
664--722
21
2.7
22
73
5
66
32
16
11
38
1.86
733--786
22
2.5
21
85
8
65
35
12
9
42
1.75
886--948
23
2.8
22
80
4
81
44
15
6
33
1.72
1065--1130
22
2.9
22
80
8
62
40
19
6
33
1.76
1074--1130
22
2.5
22
85
5
78
38
17
7
36
1.77
1066--1245
65
2.7
66
76
11
181
37
18
10
33
1.85
1147--1245
22
4.5
22
73
7
85
34
18
11
36
1.86

Tables:   1

The End!