Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000692.1 Corchorus olitorius cultivar O-4 contig00692, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13053

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--44
2
22.0
2
100
0
88
50
0
0
50
1.00
1924--1969
22
2.1
21
84
4
56
65
2
4
28
1.23
11237--11477
75
3.2
75
77
5
220
29
14
17
38
1.89
11270--11510
75
3.2
73
77
5
216
29
16
17
36
1.91
12477--12516
20
2.0
20
95
0
71
15
15
17
52
1.75

Tables:   1

The End!