Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01006979.1 Corchorus olitorius cultivar O-4 contig07004, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1136

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
423--514
46
2.0
46
91
0
148
16
33
35
14
1.88
622--680
14
4.1
14
80
10
59
72
0
23
3
0.99
627--684
13
4.4
14
84
6
68
74
0
22
3
0.97
627--699
13
5.4
14
80
8
62
73
0
23
2
0.95
646--703
15
4.1
15
82
4
59
74
0
24
1
0.92
776--845
27
2.6
27
73
8
70
35
18
12
32
1.89

Tables:   1

The End!