Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007101.1 Corchorus olitorius cultivar O-4 contig07126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2206

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55--186
47
2.8
47
80
4
149
48
7
21
22
1.75
177--306
22
6.1
22
82
7
160
56
6
22
13
1.61
177--304
43
3.0
42
80
6
152
57
7
21
14
1.61
247--284
19
2.2
17
86
13
51
57
5
26
10
1.53
182--307
41
3.0
41
81
2
153
57
7
22
13
1.61
282--380
47
2.2
44
85
8
128
54
6
18
21
1.64
1569--1715
29
5.1
29
86
0
159
17
21
25
36
1.94
1865--1898
15
2.3
15
100
0
68
20
14
17
47
1.83

Tables:   1

The End!