Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007184.1 Corchorus olitorius cultivar O-4 contig07209, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1375

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--469
2
29.5
2
90
6
88
6
0
48
45
1.28
826--1002
94
1.9
94
82
6
225
36
7
20
35
1.82
630--1107
22
21.5
22
70
10
220
37
9
18
34
1.84
919--1135
44
4.9
44
76
2
166
32
11
18
37
1.86
965--1135
89
1.9
88
81
5
202
33
12
16
37
1.86

Tables:   1

The End!