Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007256.1 Corchorus olitorius cultivar O-4 contig07281, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1177

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
810--856
6
8.2
6
86
9
62
23
51
25
0
1.49
795--856
22
2.8
22
83
9
72
24
50
25
0
1.50
795--857
28
2.2
29
86
8
94
25
49
25
0
1.51
810--857
17
2.8
18
84
12
73
25
50
25
0
1.50
810--856
11
4.1
11
88
5
67
23
51
25
0
1.49

Tables:   1

The End!