Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007257.1 Corchorus olitorius cultivar O-4 contig07282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4263

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
631--699
31
2.2
32
84
5
95
15
20
30
33
1.94
792--838
26
1.9
23
83
12
58
38
6
6
48
1.54
1618--1666
17
2.9
17
79
11
55
24
22
18
34
1.96
1625--1675
17
3.1
16
83
8
57
23
21
19
35
1.96
3251--3316
31
2.1
32
91
2
107
43
10
12
33
1.76
3362--3399
6
6.0
6
90
9
58
5
15
0
78
0.91
3362--3399
13
3.0
12
88
11
58
5
15
0
78
0.91
3949--4188
127
1.9
125
83
5
313
35
10
1
52
1.45

Tables:   1

The End!