Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007441.1 Corchorus olitorius cultivar O-4 contig07466, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4415

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
866--910
20
2.2
20
88
0
63
28
13
17
40
1.88
1555--1589
17
2.0
18
94
5
63
65
17
0
17
1.27
1566--1661
49
2.0
49
85
6
133
50
15
4
30
1.63
1633--1695
30
2.1
31
90
3
101
41
14
7
36
1.75
1869--2083
108
2.0
106
94
4
378
56
12
9
20
1.64
2255--2369
57
2.0
57
96
0
212
30
21
12
35
1.90
2806--2835
2
15.0
2
100
0
60
50
0
0
50
1.00
3188--3288
45
2.3
43
85
8
134
42
19
4
32
1.73

Tables:   1

The End!