Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007489.1 Corchorus olitorius cultivar O-4 contig07514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2891

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
121--715
32
18.8
32
75
12
457
48
7
15
28
1.72
148--184
15
2.5
15
91
8
58
56
5
16
21
1.59
99--298
67
3.0
67
83
9
243
50
6
17
26
1.69
121--717
64
9.4
64
79
9
561
48
7
15
28
1.71
121--717
96
6.3
95
81
7
578
48
7
15
28
1.71
619--752
62
2.2
64
78
11
163
52
6
15
24
1.66
767--924
57
2.9
57
85
6
202
47
5
19
27
1.70
792--1012
57
4.0
54
74
7
167
47
6
18
27
1.73
776--994
110
2.0
109
80
8
248
47
5
18
27
1.71
951--1083
57
2.4
57
89
1
205
48
9
15
26
1.75
2568--2607
19
2.1
19
85
0
53
47
2
37
12
1.55

Tables:   1

The End!