Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007492.1 Corchorus olitorius cultivar O-4 contig07517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4528

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
173--205
7
4.7
7
100
0
66
42
12
0
45
1.41
176--240
14
4.2
16
83
14
59
47
16
0
35
1.47
1298--1323
11
2.4
11
100
0
52
92
0
0
7
0.39
1337--1382
23
2.0
23
87
4
67
50
4
2
43
1.34
1384--1430
18
2.6
19
78
15
55
65
6
2
25
1.27
3400--3439
21
1.9
21
94
0
71
25
22
27
25
2.00

Tables:   1

The End!