Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007816.1 Corchorus olitorius cultivar O-4 contig07843, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1475

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--578
20
1.9
20
88
0
58
13
10
2
73
1.19
1197--1240
10
4.3
10
85
2
52
52
0
15
31
1.44
1193--1230
14
2.6
15
91
4
60
50
0
15
34
1.45
1199--1243
20
2.3
20
92
3
74
51
0
17
31
1.46

Tables:   1

The End!