Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01007976.1 Corchorus olitorius cultivar O-4 contig08003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1028

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
140--221
38
2.1
38
88
6
121
87
9
2
0
0.62
142--221
9
8.7
9
85
10
99
87
10
2
0
0.63
138--221
19
4.4
18
85
8
105
86
10
2
0
0.65
140--221
1
82.0
1
75
0
74
87
9
2
0
0.62
863--1000
50
2.8
50
95
0
240
32
18
12
36
1.88
859--1020
50
3.2
50
91
0
234
30
18
14
36
1.90

Tables:   1

The End!