Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000080.1 Corchorus olitorius cultivar O-4 contig00080, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1641

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
499--542
7
6.3
7
79
10
54
81
0
15
2
0.78
965--1043
1
79.0
1
74
0
68
87
11
1
0
0.61
965--1046
8
9.9
8
83
13
96
86
12
1
0
0.63
967--1043
35
2.2
35
93
4
129
87
11
1
0
0.62
965--1043
25
3.1
24
82
14
97
87
11
1
0
0.61
1382--1426
14
3.1
14
81
6
54
77
0
11
11
0.99
1383--1434
23
2.3
23
83
9
70
76
1
11
9
1.09

Tables:   1

The End!