Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008300.1 Corchorus olitorius cultivar O-4 contig08327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1060

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--503
21
23.9
21
85
4
602
25
11
23
39
1.89
540--661
53
2.3
53
88
0
181
43
23
8
24
1.81
593--734
74
1.9
73
84
1
185
41
24
9
23
1.85
599--757
73
2.2
73
79
5
169
44
25
8
22
1.80
499--825
126
2.6
127
86
0
458
43
24
10
22
1.84
670--788
52
2.3
52
92
4
195
43
27
7
21
1.79

Tables:   1

The End!