Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008450.1 Corchorus olitorius cultivar O-4 contig08477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1559

Tables:   1   

This is table  1  of  1  ( 3 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
447--550
35
3.1
33
86
10
133
39
21
5
33
1.77
928--960
8
4.1
8
96
0
57
72
15
3
9
1.21
1395--1559
83
2.0
81
94
4
289
33
14
13
38
1.85

Tables:   1

The End!