Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008460.1 Corchorus olitorius cultivar O-4 contig08487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5806

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1985--2030
3
15.3
3
100
0
92
32
0
0
67
0.91
2021--2080
30
2.0
30
93
0
102
15
16
16
51
1.76
2552--2648
45
2.2
45
90
5
153
37
22
5
35
1.77
3213--3322
55
2.0
55
98
0
211
34
10
14
40
1.79
3309--3356
2
23.0
2
85
12
62
47
2
4
45
1.33
3991--4042
11
4.5
11
85
7
68
21
0
1
76
0.87
3994--4035
4
11.0
4
85
10
61
23
0
2
73
0.94

Tables:   1

The End!