Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000847.1 Corchorus olitorius cultivar O-4 contig00847, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6369

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
321--531
77
2.7
77
85
1
280
34
28
17
20
1.95
1737--2085
156
2.2
156
95
0
628
34
11
20
33
1.88
2228--3056
432
1.9
432
83
5
1070
30
15
12
40
1.85
3321--3564
29
8.5
29
87
7
338
16
16
22
43
1.87
3321--3559
115
2.1
114
90
3
374
16
16
23
43
1.87
3488--3562
10
7.8
10
70
12
50
13
14
20
52
1.75

Tables:   1

The End!