Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008516.1 Corchorus olitorius cultivar O-4 contig08543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1373

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
360--407
25
1.9
25
83
8
62
58
0
0
41
0.98
787--835
6
7.8
6
93
6
80
36
14
0
48
1.44
787--835
25
2.0
25
92
8
82
36
14
0
48
1.44
942--1141
112
1.8
108
86
8
287
40
11
3
45
1.55
1117--1159
15
2.9
14
83
10
50
41
2
0
55
1.12
942--1141
109
1.8
110
86
8
291
40
11
3
45
1.55
1111--1159
21
2.5
21
87
9
68
38
4
0
57
1.18
1179--1231
21
2.6
20
80
11
63
39
5
0
54
1.24
1188--1225
15
2.5
15
91
4
58
39
7
0
52
1.31

Tables:   1

The End!