Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008563.1 Corchorus olitorius cultivar O-4 contig08590, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1522

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
226--288
30
2.1
30
81
0
72
47
7
7
36
1.62
764--794
4
7.8
4
100
0
62
25
0
22
51
1.48
634--859
65
3.2
69
87
11
302
37
5
14
42
1.69
699--899
77
2.6
77
89
6
270
37
5
14
42
1.69
627--778
65
2.3
65
100
0
304
39
5
12
42
1.65
841--871
4
7.8
4
100
0
62
25
0
22
51
1.48
885--909
10
2.5
10
100
0
50
60
8
0
32
1.26

Tables:   1

The End!