Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008672.1 Corchorus olitorius cultivar O-4 contig08699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2054

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--51
2
17.0
2
100
0
68
50
0
0
50
1.00
1084--1270
22
8.5
22
74
11
134
43
10
10
35
1.73
1084--1270
44
4.3
44
78
5
148
43
10
10
35
1.73
1297--1373
22
3.5
22
82
5
84
37
6
20
35
1.79
1406--1462
22
2.8
20
82
12
71
35
7
21
36
1.80
1503--1653
22
6.9
22
78
4
117
37
10
13
38
1.79
1525--1676
66
2.3
67
77
4
164
35
11
12
40
1.80
1525--1648
44
2.8
44
81
2
142
35
12
13
38
1.82
1525--1669
44
3.3
43
73
9
121
35
11
12
40
1.80

Tables:   1

The End!