Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008694.1 Corchorus olitorius cultivar O-4 contig08721, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1387

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
121--608
22
22.1
22
66
15
125
35
11
18
34
1.87
111--273
44
3.7
44
77
9
154
38
12
16
31
1.87
179--218
21
1.9
21
84
0
53
47
17
12
22
1.81
127--326
87
2.3
87
80
3
215
39
10
18
33
1.84
414--608
44
4.4
45
76
11
163
32
11
17
38
1.86
484--610
67
1.9
66
85
4
175
36
11
13
38
1.81
527--628
22
4.6
21
78
9
80
35
12
13
38
1.83
439--629
44
4.3
44
80
3
179
33
12
15
39
1.84
439--628
89
2.2
87
81
1
218
33
11
15
39
1.83

Tables:   1

The End!