Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008757.1 Corchorus olitorius cultivar O-4 contig08784, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1355

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
427--461
3
11.7
3
93
0
61
62
0
37
0
0.95
425--463
9
4.3
9
93
0
60
58
0
41
0
0.98
556--651
25
4.3
20
73
18
68
78
0
12
9
0.97
566--639
15
5.1
15
71
15
50
77
0
12
10
1.01
556--616
25
2.5
24
84
12
79
80
0
11
8
0.91
557--631
9
8.1
9
71
14
55
80
0
9
10
0.92
571--638
10
6.6
10
77
17
52
77
0
10
11
0.98

Tables:   1

The End!