Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008788.1 Corchorus olitorius cultivar O-4 contig08815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1221

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--27
12
2.1
12
100
0
50
44
16
0
40
1.47
65--93
14
2.1
14
100
0
58
48
13
0
37
1.43
100--174
22
3.5
22
71
21
70
65
0
10
24
1.24
101--168
14
4.7
14
83
9
75
64
0
11
23
1.26
100--174
27
2.6
28
81
10
89
65
0
10
24
1.24
118--174
14
4.2
13
80
8
60
66
0
10
22
1.22
294--322
15
1.9
15
100
0
58
41
10
6
41
1.66

Tables:   1

The End!