Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000882.1 Corchorus olitorius cultivar O-4 contig00882, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10715

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--39
2
19.5
2
100
0
78
51
0
0
48
1.00
3946--4015
6
11.8
6
77
11
65
1
20
0
78
0.83
3966--4015
10
5.1
10
78
11
50
0
18
0
82
0.68
3946--4024
27
3.0
26
74
13
81
1
22
0
75
0.87
5242--5281
21
1.9
21
90
10
64
42
10
20
27
1.83
5797--5833
19
2.0
19
94
5
67
32
0
0
67
0.91
6915--6986
29
2.4
30
86
2
92
18
13
27
40
1.88
7259--7328
35
2.0
35
91
2
115
27
12
17
42
1.85
9226--9265
11
3.5
11
89
3
62
20
27
32
20
1.97
9293--9332
21
1.9
21
89
0
62
17
5
0
77
0.94
9333--9408
31
2.5
30
82
8
91
27
25
13
34
1.93
10299--10427
66
1.9
67
92
4
217
51
8
24
16
1.72

Tables:   1

The End!