Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01008960.1 Corchorus olitorius cultivar O-4 contig08987, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1219

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
153--193
4
11.2
4
80
19
54
26
0
0
73
0.84
159--197
17
2.3
17
100
0
78
28
0
0
71
0.86
190--233
21
2.1
21
95
0
79
25
11
4
59
1.51
191--230
11
3.7
11
83
6
55
27
10
5
57
1.52
201--246
21
2.2
21
84
0
56
32
6
6
54
1.52
1050--1082
14
2.5
13
95
5
57
51
18
0
27
1.45
1050--1088
13
2.9
14
88
7
53
48
17
0
30
1.47
1124--1163
19
2.1
19
90
0
62
57
2
2
37
1.26

Tables:   1

The End!