Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000906.1 Corchorus olitorius cultivar O-4 contig00906, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1248

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
459--511
14
3.7
14
78
16
56
49
3
0
47
1.19
634--1085
22
20.9
22
72
13
235
37
9
16
36
1.80
748--820
38
1.9
38
88
0
110
38
6
17
36
1.77
795--855
23
2.7
23
89
2
88
34
3
21
40
1.69
1034--1093
22
2.8
21
87
9
86
50
8
13
28
1.70

Tables:   1

The End!