Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009102.1 Corchorus olitorius cultivar O-4 contig09130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1239

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--87
35
2.6
33
92
7
156
12
32
32
22
1.92
58--233
20
9.5
20
75
16
164
14
31
33
20
1.93
58--238
33
4.9
38
80
12
159
14
31
33
20
1.93
118--210
33
2.8
33
96
0
168
15
31
32
21
1.94
1--260
53
4.9
53
76
11
280
14
31
32
21
1.93

Tables:   1

The End!