Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000915.1 Corchorus olitorius cultivar O-4 contig00915, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3164

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--96
29
2.5
29
80
2
85
18
28
16
36
1.93
357--431
29
2.6
29
89
2
114
18
26
17
37
1.93
586--641
29
1.9
29
92
0
94
44
14
19
21
1.86
2646--2684
20
1.9
20
84
5
51
30
28
17
23
1.97
3050--3110
2
30.5
2
77
12
54
42
1
3
52
1.27

Tables:   1

The End!