Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009161.1 Corchorus olitorius cultivar O-4 contig09189, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1353

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--168
57
2.7
58
93
6
253
43
17
12
26
1.84
67--291
57
4.1
51
73
11
130
47
13
12
27
1.78
375--402
12
2.3
12
100
0
56
85
0
0
14
0.59
374--415
21
2.0
22
85
4
59
76
2
2
19
1.01
798--877
27
3.0
27
66
14
74
57
5
13
23
1.56
814--858
18
2.4
18
92
3
72
57
0
17
24
1.40
1223--1253
15
2.1
15
100
0
62
45
12
6
35
1.68

Tables:   1

The End!