Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009492.1 Corchorus olitorius cultivar O-4 contig09524, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2430

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--862
48
11.6
47
80
10
562
45
21
20
12
1.83
360--487
40
3.2
40
92
0
202
46
22
21
8
1.78
440--862
95
4.4
96
85
4
545
46
20
20
12
1.83
440--862
143
3.0
141
84
5
532
46
20
20
12
1.83
1494--1998
50
10.1
50
89
0
704
38
13
5
42
1.68
1631--1727
30
3.6
29
67
25
77
42
13
2
42
1.55
1881--1977
30
3.6
29
66
25
77
39
14
3
43
1.61

Tables:   1

The End!