Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009495.1 Corchorus olitorius cultivar O-4 contig09527, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9486

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
759--804
19
2.3
20
92
3
76
30
0
13
56
1.37
2129--2948
339
2.4
336
82
4
938
34
14
15
36
1.87
3131--3388
133
1.9
134
88
1
385
39
12
11
36
1.79
4209--4476
133
2.0
134
88
0
394
39
10
13
37
1.78
5862--6382
289
1.8
285
83
7
701
35
14
13
36
1.86
6112--8344
332
6.7
327
76
10
1687
34
14
15
36
1.88
7984--8010
2
13.5
2
100
0
54
48
0
0
51
1.00

Tables:   1

The End!