Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009499.1 Corchorus olitorius cultivar O-4 contig09531, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5421

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
877--906
5
5.8
5
96
4
51
56
0
43
0
0.99
926--970
5
8.8
5
87
4
54
71
0
26
2
0.98
926--965
21
1.9
21
89
0
62
72
0
25
2
0.97
883--1062
66
2.8
65
92
6
296
54
0
33
11
1.41
3866--5385
328
4.7
320
75
10
1122
38
16
13
32
1.87
3827--5415
331
4.9
326
74
11
1181
38
16
13
32
1.87

Tables:   1

The End!