Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009523.1 Corchorus olitorius cultivar O-4 contig09555, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2452

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--141
19
7.5
19
68
23
71
27
8
1
62
1.34
11--120
27
4.4
25
69
26
81
27
9
0
62
1.31
3--122
46
2.6
46
90
0
195
27
9
0
62
1.31
3--152
46
3.3
45
83
5
176
27
8
1
62
1.32
83--169
27
3.2
27
80
8
79
25
9
2
63
1.36
3--179
92
2.0
92
82
9
222
25
10
1
63
1.33

Tables:   1

The End!