Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009527.1 Corchorus olitorius cultivar O-4 contig09559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5233

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
563--665
28
3.7
28
93
0
161
41
23
15
19
1.89
745--1155
22
18.5
22
71
11
203
35
16
9
37
1.83
1252--1334
22
3.7
23
82
11
91
36
18
10
34
1.85
1274--1353
22
3.7
21
77
15
74
35
15
12
37
1.85
1270--1353
44
1.9
43
83
7
107
34
16
11
36
1.86
1549--1587
20
2.0
20
85
10
53
64
2
5
28
1.28
3968--4089
61
2.0
60
90
1
190
45
11
6
36
1.67

Tables:   1

The End!