Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009532.1 Corchorus olitorius cultivar O-4 contig09564, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20162

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
944--978
18
2.1
17
89
10
54
45
5
11
37
1.64
1775--1822
11
4.8
10
82
17
55
45
2
20
31
1.63
3661--3778
50
2.3
51
85
2
148
43
5
14
36
1.70
3691--3793
51
2.0
50
84
1
134
43
6
12
36
1.69
4330--4462
35
3.9
35
77
7
130
43
10
12
33
1.77
17543--17823
89
3.0
95
84
7
360
51
20
12
14
1.76
19745--19784
19
2.0
20
95
4
73
42
5
0
52
1.23
19801--19838
2
19.5
2
83
5
51
44
0
2
52
1.14

Tables:   1

The End!