Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009538.1 Corchorus olitorius cultivar O-4 contig09570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20539

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6196--6291
45
2.1
45
98
0
183
25
27
22
25
2.00
7035--7079
2
22.5
2
100
0
90
51
0
48
0
1.00
11142--11294
75
2.0
75
98
0
297
24
20
13
40
1.89
13182--13239
2
29.5
2
96
3
109
51
0
48
0
1.00
18012--18036
12
2.1
12
100
0
50
16
24
16
44
1.86
20137--20188
2
26.0
2
80
7
61
46
1
5
46
1.38

Tables:   1

The End!