Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009540.1 Corchorus olitorius cultivar O-4 contig09572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9034

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2335--2369
8
4.4
8
89
10
54
74
0
14
11
1.08
2340--2376
17
2.2
17
95
0
65
72
2
16
8
1.19
5339--5369
5
6.4
5
96
3
55
16
0
0
83
0.64
5558--5694
29
5.2
29
65
28
108
32
20
16
29
1.95
5585--5665
22
3.4
22
67
26
65
38
19
13
28
1.90
5558--5711
51
3.0
51
100
0
308
33
19
16
31
1.94
7171--7335
60
2.8
60
81
9
210
33
16
21
28
1.95
7231--7334
31
3.4
31
67
17
92
36
19
19
25
1.95
7373--7476
31
3.4
30
72
15
106
24
19
22
34
1.96
7371--7536
60
2.8
61
88
2
255
28
19
17
34
1.95

Tables:   1

The End!