Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009544.1 Corchorus olitorius cultivar O-4 contig09576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25249

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210--265
29
2.0
28
92
3
94
28
10
21
39
1.87
3234--3272
20
2.0
20
85
10
53
35
5
5
53
1.45
4188--4245
31
1.9
31
85
3
82
27
5
8
58
1.49
14673--14719
19
2.3
20
85
7
60
53
23
4
19
1.63
17340--17380
13
3.1
13
89
10
57
82
14
0
2
0.76
17343--17382
7
5.9
7
82
5
55
85
12
0
2
0.71
17340--17381
14
3.1
14
90
10
61
83
14
0
2
0.75

Tables:   1

The End!