Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009574.1 Corchorus olitorius cultivar O-4 contig09606, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7418

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
56--161
43
2.5
43
96
0
194
43
16
11
28
1.83
385--440
24
2.3
23
82
8
67
33
7
5
53
1.51
440--473
16
2.2
15
89
5
50
17
5
5
70
1.28
2903--2940
6
6.3
6
100
0
76
50
15
0
34
1.45

Tables:   1

The End!