Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009578.1 Corchorus olitorius cultivar O-4 contig09610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7343

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1008--1070
31
2.1
30
87
3
90
28
22
4
44
1.73
2385--2478
45
2.2
43
84
7
120
40
20
4
35
1.72
5242--5276
14
2.5
14
90
0
52
68
0
2
28
1.04
5259--5284
11
2.4
11
100
0
52
65
0
7
26
1.20
5247--5294
25
1.9
25
83
8
62
66
0
6
27
1.15
5962--6000
20
2.0
20
85
10
53
28
5
2
64
1.28
6168--6363
22
8.9
21
75
8
158
35
9
17
36
1.83
6198--6364
66
2.5
67
86
5
223
35
9
18
36
1.84
6709--6745
16
2.3
16
90
0
56
54
21
24
0
1.45

Tables:   1

The End!