Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009582.1 Corchorus olitorius cultivar O-4 contig09614, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9046

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1814--2080
80
3.4
79
89
1
410
27
21
18
32
1.96
2766--2800
7
4.9
7
93
6
61
85
2
11
0
0.69
2761--2800
15
2.7
15
92
3
64
85
5
10
0
0.75
2765--2802
8
5.0
8
87
6
53
84
2
13
0
0.73
6198--6725
30
17.6
30
93
0
797
28
19
22
28
1.98
7162--7253
21
4.4
21
95
2
143
28
19
26
26
1.99
8809--8862
22
2.3
24
81
12
60
24
22
5
48
1.72

Tables:   1

The End!