Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009585.1 Corchorus olitorius cultivar O-4 contig09617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6563

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29--177
22
6.8
22
73
13
128
38
14
9
38
1.78
29--201
44
4.0
42
78
10
156
36
15
9
38
1.80
29--154
66
1.9
66
82
6
157
39
12
9
38
1.76
56--213
22
7.3
21
75
12
74
35
14
10
39
1.81
154--213
20
2.9
20
80
12
59
28
18
11
41
1.85
2425--2498
35
2.1
35
84
0
94
58
4
9
28
1.48
3875--3910
2
18.0
2
94
0
63
50
2
0
47
1.15
4136--5079
441
2.1
438
91
2
1509
26
13
18
42
1.87
5860--5931
29
2.6
27
84
4
90
27
27
5
38
1.79

Tables:   1

The End!