Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009586.1 Corchorus olitorius cultivar O-4 contig09618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14254

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1020--1153
66
2.0
66
97
0
250
53
8
14
22
1.69
1632--2129
57
8.7
57
91
2
682
44
19
14
21
1.85
1632--2129
115
4.3
114
88
3
700
44
19
14
21
1.85
1578--2133
57
9.7
58
85
7
190
44
19
14
21
1.86
2155--2193
17
2.3
18
82
13
55
48
12
12
25
1.77
2989--3091
37
2.8
37
95
2
181
12
23
10
53
1.69

Tables:   1

The End!