Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009624.1 Corchorus olitorius cultivar O-4 contig09656, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14248

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1864--1909
7
6.7
7
95
5
85
15
0
41
43
1.46
1865--1906
13
3.2
13
93
6
75
14
0
42
42
1.45
1864--1909
20
2.2
21
96
3
85
15
0
41
43
1.46
9377--9419
21
2.2
19
87
8
59
62
4
27
4
1.35
12686--12723
19
2.1
19
90
5
60
73
0
0
26
0.83
13555--13590
2
18.0
2
94
0
63
47
0
0
52
1.00

Tables:   1

The End!