Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009626.1 Corchorus olitorius cultivar O-4 contig09658, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10936

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--112
10
10.3
10
70
22
62
73
0
2
23
1.02
7--86
25
3.2
26
80
10
94
70
1
0
28
0.96
2--99
19
5.2
19
71
20
64
73
1
1
24
0.96
647--830
94
1.9
97
82
7
232
36
15
16
31
1.90
1373--1414
20
2.1
20
100
0
84
40
19
9
30
1.83
5275--5313
19
2.0
20
85
5
53
43
7
0
48
1.31
6011--6084
30
2.5
30
100
0
148
45
6
16
31
1.73
6639--6671
16
2.0
17
88
5
50
45
0
3
51
1.16
6872--7351
245
1.9
247
90
1
766
31
17
24
26
1.97

Tables:   1

The End!