Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009627.1 Corchorus olitorius cultivar O-4 contig09659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3469

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
569--606
18
2.2
17
90
4
58
50
0
0
50
1.00
739--777
17
2.3
18
86
8
55
5
12
0
82
0.83
1137--1167
2
15.5
2
100
0
62
48
0
0
51
1.00
1473--1538
31
2.2
31
83
8
82
25
18
25
30
1.98
1546--1584
21
1.9
20
94
5
69
43
0
2
53
1.14
1566--1597
16
1.9
17
93
6
57
43
0
0
56
0.99
2061--2142
43
1.9
43
84
0
110
31
8
23
36
1.85

Tables:   1

The End!