Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009629.1 Corchorus olitorius cultivar O-4 contig09661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7628

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--39
2
14.5
2
100
0
58
51
0
0
48
1.00
2649--2780
39
3.4
39
73
18
123
36
18
21
23
1.95
2835--2983
38
3.9
38
76
10
133
36
18
22
22
1.95
2873--2964
38
2.4
38
90
3
141
32
18
28
20
1.96
2982--3061
38
2.1
38
90
0
124
38
15
16
30
1.89
7531--7559
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!