Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009642.1 Corchorus olitorius cultivar O-4 contig09674, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2101

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32--94
22
2.8
22
76
11
65
31
12
17
38
1.87
32--141
45
2.5
44
81
8
116
33
11
17
37
1.86
42--270
22
10.5
22
71
8
76
38
11
15
33
1.84
280--322
22
2.0
22
90
0
68
39
6
9
44
1.64
376--411
10
3.6
10
88
0
54
52
0
5
41
1.24
1270--1323
3
18.0
3
100
0
108
66
0
0
33
0.92

Tables:   1

The End!